Your results are being filtered to match entrez query: txid2759 [ORGN].

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Format for	PSI-BLAST with inclusion threshold: [?] Format for PSI-BLAST: The Position-Specific Iterated BLAST (PSI-BLAST) program performs iterative searches with a protein query, in which sequences found in one round of search are used to build a custom score model for the next round. more... Inclusion Threshold: This sets the statistical significance threshold for including a sequence in the model used by PSI-BLAST to create the PSSM on the next iteration.

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Alignment Text XML ASN.1 Hit Table(text) Hit Table(csv)	Search Strategies ASN.1	PssmWithParameters ASN.1	[?]

The Download link provides BLAST output that may be used as input to another program. This includes parseable formats such as the tabular report or XML as well as the Search Strategy files read by the BLAST+ applications. More details on the parseable (XML, tabular, and ASN.1) reports can be found at http://www.ncbi.nlm.nih.gov/books/NBK21097/

The following formats are offered under the Alignment section:
1). "Text". Non-HTML standard BLAST report.
2). "XML". XML report based upon the DTD at http://www.ncbi.nlm.nih.gov/data_specs/dtd/NCBI_BlastOutput.dtd
3). "ASN.1" Alignment. This is the alignment written out in Abstract Syntax Notation 1.
4). "Hit Table(text)". The tabular report as text.
5). "Hit Table(csv)". The tabular report ready for import into spread-sheet programs like Excel.

The following report is offered under the Search Strategy section:
1). "ASN.1" Search Strategy. A record of the parameters, query, and database used in the search. This file can be used to start a stand-alone BLAST search, see http://www.ncbi.nlm.nih.gov/books/NBK1763/#CmdLineAppsManual.I455_BLAST_search_stra

PSI blast Iteration 2

ref|XP_006521491.1| (164 letters)

Skip to the first new sequence

RID: REV6T08S01R (Expires on 05-18 22:06 pm)

Query ID: gi|568993400|ref|XP_006521491.1|; gi|568993400|ref|XP_006521491.1|
Description: PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]
Molecule type: amino acid
Query Length: 164


Database Name: refseq_protein
Description: NCBI Protein Reference Sequences See details
Program: BLASTP 2.2.29+ Citation

Reference

Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.

Reference - composition-based statistics starting in round 2

Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.

Other reports: Search Summary [Distance tree of results] [Multiple alignment]

Search Parameters
Search parameter name	Search parameter value
Program	blastp
Word size	3
Expect value	10
Hitlist size	500
Gapcosts	11,1
Matrix	BLOSUM62
Filter string	F
Genetic Code	1
Window Size	40
Threshold	11
Composition-based stats	1

Database
Database parameter name	Database parameter value
Posted date	May 15, 2014 4:49 AM
Number of letters	10,543,566,134
Number of sequences	29,268,900
Entrez query	none

Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.313986	0.267
K	0.128777	0.0349223
H	0.389274	0.14
Alpha	0.7916	1.9
Alpha_v	4.96466	42.6028
Sigma		43.6362

Descriptions

Run PSI-Blast iteration 3 with max

, Reading indexes 1-5, displaying indexes 1-5, Reading indexes 6-10, displaying indexes 6-10, Reading indexes 11-15, displaying indexes 11-15, Reading indexes 16-20, displaying indexes 16-20, Reading indexes 21-25, displaying indexes 21-25

Sequences producing significant alignments with E-value BETTER than threshold

Select:All None Selected:0 Yellow: sequences scoring below threshold on previous iteration

Sequences producing significant alignments with E-value BETTER than threshold
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1Select seq ref\|XP_006521491.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]	187	187	100%	2e-57	100%	XP_006521491.1(scored below threshold on previous iteration)
2Select seq ref\|NP_082351.1\|	tumor necrosis factor receptor superfamily member 13C [Mus musculus]	182	182	100%	4e-55	94%	NP_082351.1(scored below threshold on previous iteration)
3Select seq ref\|XP_576316.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus] >ref\|XP_001077542.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus]	171	171	88%	6e-51	81%	XP_576316.2(scored below threshold on previous iteration)
4Select seq ref\|XP_005067089.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mesocricetus auratus]	162	162	100%	4e-47	56%	XP_005067089.1(scored below threshold on previous iteration)
5Select seq ref\|XP_003512388.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus] >ref\|XP_007618644.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus]	161	161	100%	5e-47	54%	XP_003512388.1(scored below threshold on previous iteration)
6Select seq ref\|XP_004897796.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]	143	143	100%	6e-40	52%	XP_004897796.1(scored below threshold on previous iteration)
7Select seq ref\|XP_005354557.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Microtus ochrogaster]	142	142	100%	2e-39	54%	XP_005354557.1(scored below threshold on previous iteration)
8Select seq ref\|XP_006980269.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Peromyscus maniculatus bairdii]	141	141	91%	3e-39	56%	XP_006980269.1(scored below threshold on previous iteration)
9Select seq ref\|XP_004845557.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]	139	139	96%	3e-38	53%	XP_004845557.1(scored below threshold on previous iteration)
10Select seq ref\|XP_004642638.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Octodon degus]	138	138	96%	6e-38	48%	XP_004642638.1(scored below threshold on previous iteration)
11Select seq ref\|XP_003470572.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cavia porcellus]	134	134	96%	2e-36	51%	XP_003470572.1(scored below threshold on previous iteration)
12Select seq ref\|XP_004437976.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ceratotherium simum simum]	125	125	97%	6e-33	53%	XP_004437976.1(scored below threshold on previous iteration)
13Select seq ref\|XP_004650677.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Jaculus jaculus]	123	123	99%	5e-32	42%	XP_004650677.1(scored below threshold on previous iteration)
14Select seq ref\|XP_003783197.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Otolemur garnettii]	122	122	97%	8e-32	44%	XP_003783197.1(scored below threshold on previous iteration)
15Select seq ref\|XP_005379434.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Chinchilla lanigera]	123	123	96%	2e-31	48%	XP_005379434.1(scored below threshold on previous iteration)
16Select seq ref\|XP_005379433.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Chinchilla lanigera]	122	122	96%	4e-31	47%	XP_005379433.1(scored below threshold on previous iteration)
17Select seq ref\|XP_004380101.1\|	PREDICTED: uncharacterized protein LOC101359471 [Trichechus manatus latirostris]	123	123	96%	8e-31	44%	XP_004380101.1(scored below threshold on previous iteration)
18Select seq ref\|XP_002831258.2\|	PREDICTED: uncharacterized protein LOC100456696 [Pongo abelii]	124	124	88%	8e-31	49%	XP_002831258.2(scored below threshold on previous iteration)
19Select seq ref\|XP_006934224.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Felis catus]	119	119	100%	1e-30	40%	XP_006934224.1(scored below threshold on previous iteration)
20Select seq ref\|XP_002763949.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Callithrix jacchus]	118	118	97%	2e-30	48%	XP_002763949.1(scored below threshold on previous iteration)
21Select seq ref\|XP_002721429.1\|	PREDICTED: BAFF receptor-like [Oryctolagus cuniculus]	117	117	90%	7e-30	49%	XP_002721429.1(scored below threshold on previous iteration)
22Select seq ref\|XP_006866978.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Chrysochloris asiatica]	116	116	96%	2e-29	42%	XP_006866978.1(scored below threshold on previous iteration)
23Select seq ref\|XP_005515007.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Columba livia]	117	117	97%	2e-29	24%	XP_005515007.1(scored below threshold on previous iteration)
24Select seq ref\|NP_001180121.1\|	tumor necrosis factor receptor superfamily member 13C [Bos taurus]	116	116	96%	2e-29	44%	NP_001180121.1(scored below threshold on previous iteration)
25Select seq ref\|XP_007974121.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Chlorocebus sabaeus]	114	114	97%	1e-28	42%	XP_007974121.1(scored below threshold on previous iteration)
26Select seq ref\|XP_006150780.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Tupaia chinensis]	114	114	91%	1e-28	40%	XP_006150780.1(scored below threshold on previous iteration)
27Select seq ref\|XP_005237495.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Falco peregrinus] >ref\|XP_005441399.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C [Falco cherrug]	114	114	82%	2e-28	28%	XP_005237495.1(scored below threshold on previous iteration)
28Select seq ref\|XP_007939975.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Orycteropus afer afer]	113	113	96%	4e-28	44%	XP_007939975.1(scored below threshold on previous iteration)
29Select seq ref\|XP_004589522.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ochotona princeps]	113	113	97%	5e-28	46%	XP_004589522.1(scored below threshold on previous iteration)
30Select seq ref\|XP_007974122.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Chlorocebus sabaeus]	113	113	97%	5e-28	43%	XP_007974122.1(scored below threshold on previous iteration)
31Select seq ref\|NP_443177.1\|	tumor necrosis factor receptor superfamily member 13C [Homo sapiens]	111	111	97%	1e-27	49%	NP_443177.1(scored below threshold on previous iteration)
32Select seq ref\|NP_001232906.1\|	tumor necrosis factor receptor superfamily member 13C [Equus caballus]	111	111	97%	2e-27	50%	NP_001232906.1(scored below threshold on previous iteration)
33Select seq ref\|XP_005567183.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Macaca fascicularis]	110	110	97%	4e-27	39%	XP_005567183.1(scored below threshold on previous iteration)
34Select seq ref\|XP_005606750.1\|	PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 13C [Equus caballus]	109	109	97%	6e-27	39%	XP_005606750.1(scored below threshold on previous iteration)
35Select seq ref\|XP_004813971.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mustela putorius furo]	109	109	100%	9e-27	42%	XP_004813971.1(scored below threshold on previous iteration)
36Select seq ref\|XP_003264675.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Nomascus leucogenys]	109	109	97%	2e-26	40%	XP_003264675.1(scored below threshold on previous iteration)
37Select seq ref\|XP_007079578.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Panthera tigris altaica]	107	107	100%	2e-26	40%	XP_007079578.1(scored below threshold on previous iteration)
38Select seq ref\|XP_001101623.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Macaca mulatta] >ref\|XP_005567184.1\| PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Macaca fascicularis]	108	108	97%	2e-26	39%	XP_001101623.2(scored below threshold on previous iteration)
39Select seq ref\|XP_004397517.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Odobenus rosmarus divergens]	108	108	100%	2e-26	53%	XP_004397517.1(scored below threshold on previous iteration)
40Select seq ref\|XP_007523491.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Erinaceus europaeus]	108	108	91%	3e-26	46%	XP_007523491.1(scored below threshold on previous iteration)
41Select seq ref\|XP_005488807.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Zonotrichia albicollis]	108	108	97%	5e-26	25%	XP_005488807.1(scored below threshold on previous iteration)
42Select seq ref\|XP_003419857.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Loxodonta africana]	106	106	96%	8e-26	41%	XP_003419857.1(scored below threshold on previous iteration)
43Select seq ref\|XP_004063616.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Gorilla gorilla gorilla]	106	106	97%	1e-25	43%	XP_004063616.1(scored below threshold on previous iteration)
44Select seq ref\|XP_004315226.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Tursiops truncatus]	104	104	91%	1e-24	51%	XP_004315226.1(scored below threshold on previous iteration)
45Select seq ref\|XP_005907254.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bos mutus]	102	102	96%	1e-24	39%	XP_005907254.1(scored below threshold on previous iteration)
46Select seq ref\|XP_002192624.2\|	PREDICTED: uncharacterized protein LOC100226292 [Taeniopygia guttata]	104	104	89%	2e-24	25%	XP_002192624.2(scored below threshold on previous iteration)
47Select seq ref\|XP_005040004.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ficedula albicollis]	101	101	96%	2e-23	24%	XP_005040004.1(scored below threshold on previous iteration)
48Select seq ref\|XP_004279694.1\|	PREDICTED: uncharacterized protein LOC101276202 [Orcinus orca]	102	102	90%	4e-23	50%	XP_004279694.1(scored below threshold on previous iteration)
49Select seq ref\|XP_006890241.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Elephantulus edwardii]	99.2	99.2	93%	6e-23	46%	XP_006890241.1(scored below threshold on previous iteration)
50Select seq ref\|XP_007189364.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Balaenoptera acutorostrata scammoni]	98.8	98.8	90%	7e-23	45%	XP_007189364.1(scored below threshold on previous iteration)
51Select seq ref\|XP_004676483.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Condylura cristata]	99.2	99.2	96%	8e-23	45%	XP_004676483.1(scored below threshold on previous iteration)
52Select seq ref\|XP_006069000.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bubalus bubalis]	97.6	97.6	96%	2e-22	39%	XP_006069000.1(scored below threshold on previous iteration)
53Select seq ref\|XP_006917430.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pteropus alecto]	98.4	98.4	97%	2e-22	38%	XP_006917430.1(scored below threshold on previous iteration)
54Select seq ref\|XP_007454156.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Lipotes vexillifer]	98.4	98.4	90%	2e-22	50%	XP_007454156.1(scored below threshold on previous iteration)
55Select seq ref\|XP_004771280.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X3 [Mustela putorius furo]	97.3	97.3	100%	3e-22	45%	XP_004771280.1(scored below threshold on previous iteration)
56Select seq ref\|XP_004771279.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Mustela putorius furo]	96.9	96.9	100%	5e-22	45%	XP_004771279.1(scored below threshold on previous iteration)
57Select seq ref\|XP_004771278.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mustela putorius furo]	96.5	96.5	100%	9e-22	44%	XP_004771278.1(scored below threshold on previous iteration)
58Select seq ref\|XP_849061.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform 2 [Canis lupus familiaris]	96.1	96.1	89%	1e-21	43%	XP_849061.1(scored below threshold on previous iteration)
59Select seq ref\|XP_005527798.1\|	PREDICTED: uncharacterized protein LOC102103626 [Pseudopodoces humilis]	95.3	95.3	89%	3e-21	24%	XP_005527798.1(scored below threshold on previous iteration)
60Select seq ref\|XP_007099994.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Physeter catodon]	94.9	94.9	90%	6e-21	38%	XP_007099994.1(scored below threshold on previous iteration)
61Select seq ref\|XP_006207250.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Vicugna pacos]	92.6	92.6	90%	9e-21	36%	XP_006207250.1(scored below threshold on previous iteration)
62Select seq ref\|XP_006259961.1\|	PREDICTED: uncharacterized protein LOC102561983 [Alligator mississippiensis]	93.8	93.8	89%	1e-20	26%	XP_006259961.1(scored below threshold on previous iteration)
63Select seq ref\|XP_006027737.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Alligator sinensis]	93.0	93.0	89%	2e-20	26%	XP_006027737.1(scored below threshold on previous iteration)
64Select seq ref\|XP_002926730.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Ailuropoda melanoleuca]	90.3	90.3	100%	3e-20	39%	XP_002926730.1(scored below threshold on previous iteration)
65Select seq ref\|XP_001154286.1\|	PREDICTED: uncharacterized protein LOC746611 [Pan troglodytes]	86.5	86.5	76%	2e-17	46%	XP_001154286.1(scored below threshold on previous iteration)
66Select seq ref\|XP_005322468.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ictidomys tridecemlineatus]	83.8	83.8	62%	4e-17	56%	XP_005322468.1(scored below threshold on previous iteration)
67Select seq ref\|XP_005422009.1\|	PREDICTED: protein shisa-6 homolog [Geospiza fortis]	85.7	85.7	89%	6e-17	23%	XP_005422009.1(scored below threshold on previous iteration)
68Select seq ref\|XP_006740425.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Leptonychotes weddellii]	77.6	77.6	39%	1e-15	48%	XP_006740425.1(scored below threshold on previous iteration)
69Select seq ref\|XP_003814704.1\|	PREDICTED: uncharacterized protein LOC100968929 [Pan paniscus]	80.7	80.7	35%	4e-15	61%	XP_003814704.1(scored below threshold on previous iteration)
70Select seq ref\|XP_002688013.2\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Bos taurus]	72.2	72.2	71%	3e-13	45%	XP_002688013.2(scored below threshold on previous iteration)
71Select seq ref\|XP_005984806.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pantholops hodgsonii]	70.3	70.3	96%	9e-13	37%	XP_005984806.1(scored below threshold on previous iteration)
72Select seq ref\|XP_003933016.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Saimiri boliviensis boliviensis]	69.1	69.1	62%	2e-12	47%	XP_003933016.1(scored below threshold on previous iteration)
73Select seq ref\|NP_001032917.1\|	tumor necrosis factor receptor superfamily, member 13C [Gallus gallus]	69.1	69.1	95%	8e-12	26%	NP_001032917.1(scored below threshold on previous iteration)
74Select seq ref\|XP_004023694.1\|	PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 13C-like [Ovis aries]	68.7	68.7	85%	1e-11	35%	XP_004023694.1(scored below threshold on previous iteration)
75Select seq ref\|XP_006174789.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Camelus ferus]	66.8	66.8	43%	1e-11	49%	XP_006174789.1(scored below threshold on previous iteration)
76Select seq ref\|XP_003202364.1\|	PREDICTED: hypothetical protein LOC100547247 [Meleagris gallopavo]	63.7	63.7	95%	5e-10	21%	XP_003202364.1(scored below threshold on previous iteration)
77Select seq ref\|XP_005681248.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Capra hircus]	62.6	62.6	74%	1e-09	34%	XP_005681248.1(scored below threshold on previous iteration)
78Select seq ref\|XP_003905673.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Papio anubis]	59.9	59.9	45%	3e-09	36%	XP_003905673.1(scored below threshold on previous iteration)
79Select seq ref\|XP_003905674.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Papio anubis]	59.9	59.9	67%	6e-09	37%	XP_003905674.1(scored below threshold on previous iteration)
80Select seq ref\|XP_006120590.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Pelodiscus sinensis]	60.7	60.7	84%	7e-09	26%	XP_006120590.1(scored below threshold on previous iteration)
81Select seq ref\|XP_004700749.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Echinops telfairi]	57.6	110	72%	2e-08	40%	XP_004700749.1(scored below threshold on previous iteration)
82Select seq ref\|XP_004484190.1\|	PREDICTED: tumor necrosis factor receptor superfamily member 13C [Dasypus novemcinctus]	55.6	110	42%	1e-07	79%	XP_004484190.1(scored below threshold on previous iteration)
83Select seq ref\|XP_003221050.1\|	PREDICTED: hypothetical protein LOC100552660 [Anolis carolinensis]	54.5	54.5	92%	1e-06	21%	XP_003221050.1(scored below threshold on previous iteration)
84Select seq ref\|XP_005598965.1\|	PREDICTED: LOW QUALITY PROTEIN: tumor necrosis factor receptor superfamily member 17 [Equus caballus]	46.4	46.4	87%	8e-04	23%	XP_005598965.1(scored below threshold on previous iteration)

Sequences with E-value WORSE than threshold

Select:All None Selected:0 Yellow: sequences scoring below threshold on previous iteration

Sequences with E-value WORSE than threshold
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession	Select for PSI blast	Used to build PSSM

Run PSI-Blast iteration 3 with max

Alignments

Download GenPept Graphics Next Previous Descriptions

PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Mus musculus]

Sequence ID: ref|XP_006521491.1|Length: 164Number of Matches: 1

See 2 more title(s)

Related Information

Gene-associated gene details

Identical Proteins-Proteins identical to the subject

Range 1: 1 to 164GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
187 bits(475)	2e-57()	Composition-based stats.	164/164(100%)	164/164(100%)	0/164(0%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP
Sbjct  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH  120
            QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH
Sbjct  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH  120

Query  121  ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ
Sbjct  121  ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164

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tumor necrosis factor receptor superfamily member 13C [Mus musculus]

Sequence ID: ref|NP_082351.1|Length: 175Number of Matches: 1

Related Information

Gene-associated gene details

UniGene-clustered expressed sequence tags

Map Viewer-aligned genomic context

Range 1: 1 to 175GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
182 bits(461)	4e-55()	Composition-based stats.	164/175(94%)	164/175(93%)	11/175(6%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP
Sbjct  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ----  116
            QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ    
Sbjct  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQESLE  120

Query  117  -------ETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                   ETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ
Sbjct  121  NVFVPSSETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  175

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PREDICTED: tumor necrosis factor receptor superfamily member 13C-like [Rattus norvegicus]

Sequence ID: ref|XP_576316.2|Length: 175Number of Matches: 1

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Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Identical Proteins-Proteins identical to the subject

Range 1: 20 to 175GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
171 bits(433)	6e-51()	Composition-based stats.	127/156(81%)	132/156(84%)	11/156(7%)

Query  20   TQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQPQEGSALRPDVALLVGAPAL  79
            TQCNQTECFDPLVRNCVSCELF+TP+T H SSLEPGTALQPQEGS LRPDVALL GAPAL
Sbjct  20   TQCNQTECFDPLVRNCVSCELFYTPETRHASSLEPGTALQPQEGSGLRPDVALLFGAPAL  79

Query  80   LGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ-----------ETPHASAPTWPP  128
            LGL+LALTLVGLVSLV WRWRQQ RTAS DTSEGVQQ           ET HASAP WPP
Sbjct  80   LGLVLALTLVGLVSLVGWRWRQQRRTASLDTSEGVQQESLENVFVPPSETLHASAPNWPP  139

Query  129  LKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
             KEDAD+ L  HS+PVPATELGSTELVTTKTAGPEQ
Sbjct  140  FKEDADNILSCHSIPVPATELGSTELVTTKTAGPEQ  175

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Mesocricetus auratus]

Sequence ID: ref|XP_005067089.1|Length: 179Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 1 to 179GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
162 bits(409)	4e-47()	Composition-based stats.	100/179(56%)	117/179(65%)	15/179(8%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGAR+   RS+RSRDS +PT C QT CFDPLVR+CV+C L  TPD  H SS  PGTALQP
Sbjct  1    MGARKREARSRRSRDSPMPTPCVQTLCFDPLVRHCVACNLLRTPDPLHASSQAPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGL----ILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ  116
            QE           +  P LL      +  +  + LV+LV+WRWRQQ R ASP T +GVQ+
Sbjct  61   QESVGTGAGPDARLPLPGLLFGAPALLGLMLALALVALVTWRWRQQRRMASPGTPDGVQE  120

Query  117  ETPH-----------ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            E+             ASAP WP  KEDAD+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  121  ESLDNVFVSSSETLHASAPIWPTPKEDADTTLPGHSIPVPATELGSTELVTTKTAGPEE  179

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cricetulus griseus]

Sequence ID: ref|XP_003512388.1|Length: 179Number of Matches: 1

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Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Identical Proteins-Proteins identical to the subject

Range 1: 1 to 179GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
161 bits(408)	5e-47()	Composition-based stats.	97/179(54%)	115/179(64%)	15/179(8%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGAR+   +S+RSRDS + T C QT CFDPLVR+CV+C L  TPD  H SS  PGTALQP
Sbjct  1    MGARKREAKSRRSRDSPMTTPCVQTLCFDPLVRHCVACNLLRTPDPLHASSHAPGTALQP  60

Query  61   QEGSALRPDVALLVGAPALLGL----ILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQ  116
            QE     P     +  P LL      +  +  + LV+LV+WRW QQ R ASP T +GVQ+
Sbjct  61   QESVGTGPGPDTTLPLPGLLFGAPALLGLMLALALVALVTWRWWQQRRMASPGTPDGVQE  120

Query  117  ETPH-----------ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            E+             ASAP WP  KED D+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  121  ESLDNVFVSSSETLHASAPIWPTPKEDVDTTLPGHSIPVPATELGSTELVTTKTAGPEE  179

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]

Sequence ID: ref|XP_004897796.1|Length: 181Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 4 to 180GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
143 bits(360)	6e-40()	Composition-based stats.	93/178(52%)	107/178(60%)	15/178(8%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHT--PDTGHTSSLEPGTAL  58
            +    LR RS +     VPT+C Q ECFD LVR+CV+C L  T  P     SS  PGT L
Sbjct  4    LSTMGLRGRSLKGMSGPVPTRCIQAECFDHLVRHCVACSLLRTAEPRAVGASSQAPGTVL  63

Query  59   QPQE----GSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGV  114
            QPQE    G+   P   LL GAP +LGL LAL LV  V+LVSWRWRQ+    +P+ S+  
Sbjct  64   QPQESVGVGATGLPLPGLLFGAPVVLGLALALALVL-VALVSWRWRQRRTLEAPEGSQEE  122

Query  115  Q--------QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                       TP ASAP WP  +E   +  P HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  123  PLDNVYVPSPGTPDASAPVWPEPREHPATTPPSHSVPVPATELGSTELVTTKTAGPEQ  180

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Microtus ochrogaster]

Sequence ID: ref|XP_005354557.1|Length: 176Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 1 to 176GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
142 bits(357)	2e-39()	Composition-based stats.	97/179(54%)	111/179(62%)	18/179(10%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MGAR+   RS+RSRDS +PT C Q  CFDPLVR C+ C L  TPD        PGTALQP
Sbjct  1    MGARKRGTRSRRSRDSPMPTPCIQALCFDPLVRRCLECNLLRTPDPPRH---APGTALQP  57

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVS----WRWRQQLRTASPDTSEGVQQ  116
            QE     P     +  P LL    AL  + LV ++     WRW +Q R ASPDT +GVQ+
Sbjct  58   QESVGTGPGPDATLPLPGLLFGAPALLGLVLVLVLVALVIWRWWRQRRMASPDTPDGVQE  117

Query  117  -----------ETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                       ETP ASAP WP  KEDAD+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  118  ESLDNVFVSSSETPPASAPIWPTPKEDADATLPSHSIPVPATELGSTELVTTKTAGPEE  176

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Peromyscus maniculatus bairdii]

Sequence ID: ref|XP_006980269.1|Length: 179Number of Matches: 1

Related Information

Gene-associated gene details

Range 1: 15 to 179GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
141 bits(355)	3e-39()	Composition-based stats.	92/165(56%)	105/165(63%)	15/165(9%)

Query  15   DSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQPQEGSALRPDVALLV  74
            DS VPT C QT CFDPLVR+CV+CEL  TPD        PGTALQPQE   + P     +
Sbjct  15   DSPVPTPCVQTLCFDPLVRHCVACELLRTPDPPRHGKQAPGTALQPQESVGMGPGTDATL  74

Query  75   GAPALLGLIL----ALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH----------  120
              P LL         + LV LV+LV+WRW QQ R ASPD  +GVQ+E+            
Sbjct  75   PLPGLLFGAPALLGLVLLVLLVALVTWRWWQQRRMASPDIPDGVQEESLDNVYVSSPETL  134

Query  121  -ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
             ASAP WP  KEDAD+ LP HS+PVPATELGSTELVTTKTAGPE+
Sbjct  135  HASAPVWPTPKEDADTTLPGHSIPVPATELGSTELVTTKTAGPEE  179

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Heterocephalus glaber]

Sequence ID: ref|XP_004845557.1|Length: 175Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 3 to 174GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
139 bits(349)	3e-38()	Composition-based stats.	92/173(53%)	105/173(60%)	15/173(8%)

Query  6    LRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHT--PDTGHTSSLEPGTALQPQE-  62
            L  RS +     VPT+C Q ECFD LVR+CV+C L  T  P     SS  PGT LQPQE 
Sbjct  3    LGGRSLKGMSGPVPTRCIQAECFDHLVRHCVACSLLRTAEPRAVGASSQAPGTVLQPQES  62

Query  63   ---GSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ----  115
               G+   P   LL GAP +LGL LAL LV  V+LVSWRWRQ+    +P+ S+       
Sbjct  63   VGVGATGLPLPGLLFGAPVVLGLALALALVL-VALVSWRWRQRRTLEAPEGSQEEPLDNV  121

Query  116  ----QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                  TP ASAP WP  +E   +  P HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  122  YVPSPGTPDASAPVWPEPREHPATTPPSHSVPVPATELGSTELVTTKTAGPEQ  174

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Octodon degus]

Sequence ID: ref|XP_004642638.1|Length: 183Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 3 to 182GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
138 bits(347)	6e-38()	Composition-based stats.	86/181(48%)	97/181(53%)	23/181(12%)

Query  6    LRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT--GHTSSLEPGTALQPQEG  63
               R  +  +   PT C Q +CFD LVR+CV C+L  TP+      SS  PGTALQPQE 
Sbjct  3    QGARGLQGMNGPGPTHCVQAKCFDQLVRHCVDCKLLRTPEPRAAGASSQAPGTALQPQES  62

Query  64   SALR------PDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLR-------------  104
                      P   LL G P LLGL L L LV  V+LVSW+WRQ+               
Sbjct  63   VGAGTPQAVLPLPGLLFGVPVLLGLALLLALVL-VALVSWKWRQRRTLEALERSQDGESH  121

Query  105  -TASPDTSEGVQQETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPE  163
                PD        TP ASAP WP  +ED  +    HSVPVPATELGSTELVTTKTAGPE
Sbjct  122  VGKPPDNIYIPSSGTPDASAPVWPAPREDPAATPSSHSVPVPATELGSTELVTTKTAGPE  181

Query  164  Q  164
            Q
Sbjct  182  Q  182

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Cavia porcellus]

Sequence ID: ref|XP_003470572.1|Length: 179Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 4 to 178GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
134 bits(337)	2e-36()	Composition-based stats.	89/176(51%)	102/176(57%)	19/176(10%)

Query  7    RVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT--GHTSSLEPGTALQPQEGS  64
              RS +      PT+C QTECFD LVR+CVSC L  TP+      SS  PGT LQPQE  
Sbjct  4    GSRSLKGMSGPAPTRCVQTECFDHLVRHCVSCRLLRTPEPRAAGASSQAPGTVLQPQESV  63

Query  65   ALR------PDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQE-  117
                     P   LL GAP LLGL L L LV  V+LVSW+WRQ+    + + S+   +  
Sbjct  64   GAGTPEAMLPMPGLLFGAPVLLGLALLLALVL-VALVSWKWRQRRTQEALEKSQDAPEPL  122

Query  118  ---------TPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                     TP ASAP WP  +ED  +    HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  123  DSVYILSSGTPDASAPDWPTPREDPATTPSSHSVPVPATELGSTELVTTKTAGPEQ  178

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Ceratotherium simum simum]

Sequence ID: ref|XP_004437976.1|Length: 184Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 2 to 183GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
125 bits(314)	6e-33()	Composition-based stats.	97/183(53%)	106/183(57%)	24/183(13%)

Query  5    RLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHT--SSLEPGTALQPQE  62
            R   RS + RD S PTQC Q ECFDPLVRNCV+C L  TP+      SSL PGTALQP+E
Sbjct  2    RRGARSLKGRDGSAPTQCVQAECFDPLVRNCVACRLLRTPEPRPAAGSSLAPGTALQPEE  61

Query  63   GSALR--------PDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGV  114
                         P  ALL GAPA LGL LAL LVGLVS    R R     A+P+  +G 
Sbjct  62   SVGAGVAEAEATLPLPALLFGAPAGLGLALALVLVGLVSWRWRRRRLG-GVAAPEAPDGD  120

Query  115  QQET-------------PHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAG  161
            Q                  A  P WPP +ED D+  P HSVPVPATELGSTELVTTKTAG
Sbjct  121  QDGESALDNVIIVSPGLLDAKTPVWPPPREDPDATPPAHSVPVPATELGSTELVTTKTAG  180

Query  162  PEQ  164
            PEQ
Sbjct  181  PEQ  183

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Jaculus jaculus]

Sequence ID: ref|XP_004650677.1|Length: 178Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 1 to 178GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
123 bits(307)	5e-32()	Composition-based stats.	77/183(42%)	100/183(54%)	25/183(13%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLE----PGT  56
            MG  R RVRS       VPT C Q +CFD LVR+CV+C L  TP+    ++      PGT
Sbjct  1    MGTARRRVRS-----GPVPTPCVQAQCFDLLVRHCVACNLLRTPEPRGAAAAASSQAPGT  55

Query  57   ALQPQEGSALRPDVALLVGAPALLGLILALTLVGLVSLV----SWRWRQQLRTASPDTSE  112
            ALQPQE       +   +  P LL    AL  + L   +    SW+W+QQ +T++P+T +
Sbjct  56   ALQPQESVGASAGLEAALPLPGLLFGAPALLGLALALALVAVVSWKWKQQCKTSAPETPD  115

Query  113  G------------VQQETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTA  160
                         +  E+   SAP     +E++DS    HS+PVPATELGSTELVTTKTA
Sbjct  116  EGQDAPEPLDNVFIPLESLDTSAPGCSTPREESDSTPQGHSIPVPATELGSTELVTTKTA  175

Query  161  GPE  163
            GPE
Sbjct  176  GPE  178

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Otolemur garnettii]

Sequence ID: ref|XP_003783197.1|Length: 183Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 2 to 182GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
122 bits(306)	8e-32()	Composition-based stats.	80/181(44%)	93/181(51%)	21/181(11%)

Query  5    RLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPD--TGHTSSLEPGTALQPQE  62
            +   R  R RD  VPT C   +CFDPL+R CV CELF TP+      SS+ PGTALQPQE
Sbjct  2    QRGARRPRGRDGPVPTSCYPAQCFDPLLRLCVDCELFRTPEARPAGLSSVVPGTALQPQE  61

Query  63   GSALRPDVALL-----VGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ--  115
                    A L     +     L  +     + LV LVSWR+R+    ASP      Q  
Sbjct  62   SVGAGGSEAALPLSGLLLGAPALLGLALALALALVGLVSWRYRRLRGAASPQAPNEGQHA  121

Query  116  -----------QETPHASAPTWPPLK-EDADSALPRHSVPVPATELGSTELVTTKTAGPE  163
                         T   +AP WP  + ED  +  P HSVPVPATELGSTELVTTKTAG E
Sbjct  122  PEPLDNVIVLSPGTIDTTAPVWPLPREEDPGTTPPGHSVPVPATELGSTELVTTKTAGLE  181

Query  164  Q  164
            Q
Sbjct  182  Q  182

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PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X2 [Chinchilla lanigera]

Sequence ID: ref|XP_005379434.1|Length: 229Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 56 to 228GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
123 bits(307)	2e-31()	Composition-based stats.	83/174(48%)	97/174(55%)	17/174(9%)

Query  7    RVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT--GHTSSLEPGTALQPQEGS  64
              RS +      PT+C Q ECFD LVR+CV+C L  TP+      SS  PGTALQPQE  
Sbjct  56   GARSLKGVSGPGPTRCVQAECFDQLVRHCVACRLLRTPEPRAAGASSQAPGTALQPQESV  115

Query  65   ALR------PDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ---  115
                     P   LL G P LLGL L L LV  V+LVSW+WRQ+    + + ++      
Sbjct  116  GPGAPQPMLPLPGLLFGIPTLLGLALLLALVL-VALVSWKWRQRRTLEALERNQEEPLEN  174

Query  116  -----QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                   TP  SAP  P   ED  +  P HSVPVPATELG T+LVTTKTAGPEQ
Sbjct  175  VYIPSSGTPDTSAPVCPAPGEDPATTPPSHSVPVPATELGPTQLVTTKTAGPEQ  228

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PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Chinchilla lanigera]

Sequence ID: ref|XP_005379433.1|Length: 230Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 56 to 229GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
122 bits(305)	4e-31()	Composition-based stats.	83/175(47%)	97/175(55%)	18/175(10%)

Query  7    RVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT---GHTSSLEPGTALQPQEG  63
              RS +      PT+C Q ECFD LVR+CV+C L  TP+       SS  PGTALQPQE 
Sbjct  56   GARSLKGVSGPGPTRCVQAECFDQLVRHCVACRLLRTPEPRAAAGASSQAPGTALQPQES  115

Query  64   SALR------PDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ--  115
                      P   LL G P LLGL L L LV  V+LVSW+WRQ+    + + ++     
Sbjct  116  VGPGAPQPMLPLPGLLFGIPTLLGLALLLALVL-VALVSWKWRQRRTLEALERNQEEPLE  174

Query  116  ------QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                    TP  SAP  P   ED  +  P HSVPVPATELG T+LVTTKTAGPEQ
Sbjct  175  NVYIPSSGTPDTSAPVCPAPGEDPATTPPSHSVPVPATELGPTQLVTTKTAGPEQ  229

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PREDICTED: uncharacterized protein LOC101359471 [Trichechus manatus latirostris]

Sequence ID: ref|XP_004380101.1|Length: 350Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 175 to 349GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
123 bits(309)	8e-31()	Composition-based stats.	77/176(44%)	90/176(51%)	18/176(10%)

Query  6    LRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHT---PDTGHTSSLEPGTALQPQE  62
            L  RS   RD   PT C Q ECFD L+R CV+C LF T         SS   GTALQPQE
Sbjct  175  LGARSMGGRDGPEPTLCGQAECFDRLLRLCVACNLFRTPEPSPAASASSPATGTALQPQE  234

Query  63   --GSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASP-DTSEGVQQETP  119
              G+   P  AL + A       L    + L  +    WR++ R A P +  +  +  TP
Sbjct  235  SVGAGAFPQGALPLPALLFGAPALLALALALGLVGLLSWRRRRRGAVPLEAPDRDRNGTP  294

Query  120  -----------HASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                        A+ P W P  ED  +  P HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  295  DNVIILSPGPIDATTPVWSPP-EDPATTPPGHSVPVPATELGSTELVTTKTAGPEQ  349

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PREDICTED: uncharacterized protein LOC100456696 [Pongo abelii]

Sequence ID: ref|XP_002831258.2|Length: 399Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 232 to 398GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
124 bits(310)	8e-31()	Composition-based stats.	82/167(49%)	93/167(55%)	22/167(13%)

Query  20   TQCNQTECFDPLVRNCVSCELFHTP--DTGHTSSLEPGTALQPQE------GSALRPDVA  71
            T C   ECFD LVR+CV+C L  TP       SS  P TALQPQE      G A  P   
Sbjct  232  TPCIPAECFDLLVRHCVACGLLRTPRPKPAGASSPAPRTALQPQESVGAGAGEAALPLPG  291

Query  72   LLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETP------------  119
            LL GAPALLGL L L LV +  L   R +++LR AS   +    ++ P            
Sbjct  292  LLFGAPALLGLALVLALVLVGLLSRRRRQRRLRGASSAEAPDGDKDAPEPLDKVIILSPG  351

Query  120  --HASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
               A+AP WPP   D  +  P HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  352  ISDATAPAWPPPGADPGTTPPGHSVPVPATELGSTELVTTKTAGPEQ  398

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Felis catus]

Sequence ID: ref|XP_006934224.1|Length: 165Number of Matches: 1

Related Information

Gene-associated gene details

Range 1: 1 to 164GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
119 bits(297)	1e-30()	Composition-based stats.	66/164(40%)	80/164(48%)	0/164(0%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            MG+RR   RS R R+ + PT+C   +CFDPLVR CV C L  TP+ G   S     A Q 
Sbjct  1    MGSRRRGARSLRGREGAAPTKCVVDKCFDPLVRKCVDCRLLRTPEPGPGKSRPALPAGQR  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH  120
                      A          L     + G  + +      +      D       +   
Sbjct  61   GSPGEGEEVPATAAPPLPEPQLPEQEGVGGYDATLILYSLPRPPPEPLDDVIIHPPKPLD  120

Query  121  ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
            A+AP WPP +ED  +  P HSVPVPATELGSTELVTTKTAGPEQ
Sbjct  121  ATAPVWPPPREDPANTPPAHSVPVPATELGSTELVTTKTAGPEQ  164

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Callithrix jacchus]

Sequence ID: ref|XP_002763949.1|Length: 184Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 2 to 184GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
118 bits(296)	2e-30()	Composition-based stats.	88/183(48%)	100/183(54%)	23/183(12%)

Query  5    RLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFH--TPDTGHTSSLEPGTALQPQE  62
            R   RS R RD+ VPT C  TEC+D LVR CV C L     P T   SS  PGTALQPQE
Sbjct  2    RRGPRSLRGRDAPVPTPCVPTECYDLLVRKCVDCRLLRRSPPKTAGASSPAPGTALQPQE  61

Query  63   ------GSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQ-LRTASPDTSEGVQ  115
                  G    P   LL GAPALLGL+L L LV +  +   R +Q+    AS +  +   
Sbjct  62   SVGPGAGEVSLPVPRLLFGAPALLGLVLVLALVLVGLVSWRRRQQRLRGAASSEAPDDGD  121

Query  116  QETP--------------HASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAG  161
            +  P               A+A  WPP  ED  +  P HSVPVPATELGSTELVTTKTAG
Sbjct  122  EAAPEPLDKLIILSPGTTDATASAWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTAG  181

Query  162  PEQ  164
            PEQ
Sbjct  182  PEQ  184

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PREDICTED: BAFF receptor-like [Oryctolagus cuniculus]

Sequence ID: ref|XP_002721429.1|Length: 183Number of Matches: 1

Related Information

Gene-associated gene details

Map Viewer-aligned genomic context

Range 1: 14 to 182GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
117 bits(293)	7e-30()	Composition-based stats.	82/169(49%)	94/169(55%)	21/169(12%)

Query  17   SVPTQCNQTECFDPLVRNCVSCELFHTPD--TGHTSSLEPGTALQPQEGSA------LRP  68
              PT C Q +CFDPL R+CV+C L H  +      SSL PGTALQPQE           P
Sbjct  14   PAPTSCVQAQCFDPLTRHCVACYLLHMQESRPAGASSLAPGTALQPQESVGTGIPDGALP  73

Query  69   DVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQ-------------  115
               LL GAP LLGL LAL L  L  +   R R+     SP+  +G Q             
Sbjct  74   LPGLLFGAPVLLGLALALALALLALVSWKRRRRWPGVPSPEARDGDQDTPESLDDVIVFS  133

Query  116  QETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
               P A+AP  PP  E+A +A P HS+PVPATELGSTELVTTKTAGPEQ
Sbjct  134  PGCPDATAPNSPPPGEEAGTAPPSHSIPVPATELGSTELVTTKTAGPEQ  182

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Chrysochloris asiatica]

Sequence ID: ref|XP_006866978.1|Length: 178Number of Matches: 1

Related Information

Gene-associated gene details

Range 1: 3 to 177GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
116 bits(290)	2e-29()	Composition-based stats.	74/176(42%)	87/176(49%)	18/176(10%)

Query  6    LRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPD---TGHTSSLEPGTALQPQE  62
               RS   RD   P QC Q +CFD L+R CV+C LF TP+       SS   GTA QPQE
Sbjct  3    RGARSMGGRDGPAPPQCGQGKCFDSLLRACVACRLFRTPEPSPAAGASSSASGTAPQPQE  62

Query  63   --GSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETP-  119
              G+   P  AL +         L    + LV +    WR+Q   A+P  +       P 
Sbjct  63   SVGADAGPQGALPLPGLLFGAPALLGLALALVLVCLVHWRRQRGGAAPPETPDCDGNEPL  122

Query  120  -----------HASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAGPEQ  164
                         +AP WPP  ED  +  P HSVPVPATELGSTELVTTKT GPEQ
Sbjct  123  DNVIVLSPGSTDVTAPIWPPP-EDPATTPPGHSVPVPATELGSTELVTTKTMGPEQ  177

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PREDICTED: tumor necrosis factor receptor superfamily member 13C [Columba livia]

Sequence ID: ref|XP_005515007.1|Length: 215Number of Matches: 1

Related Information

Gene-associated gene details

Range 1: 4 to 206GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
117 bits(292)	2e-29()	Composition-based stats.	49/206(24%)	78/206(37%)	49/206(23%)

Query  1    MGARRLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDTGHTSSLEPGTALQP  60
            +G+R     S   +D+   + C  ++CFD L + CV C       T   +   P +A +P
Sbjct  4    LGSRSHSDMSSSGKDA---SSCLSSQCFDTLTKLCVECSDLLKDHTTEPTRAAPTSAQEP  60

Query  61   QEGSALRPDVALLVGAPALLGLILALTL-VGLVSLVSWRWRQQLRTASPDTSEGVQQETP  119
               S   P   L+ G PA++G IL L    G ++  + + R++ +    +T   V    P
Sbjct  61   TLPSVNLPSTLLIFGVPAMVGFILVLAALWGFLACKAGKQRRKRKAVDKETEANVDATGP  120

Query  120  ---------------------------------HASAPTWPPLKEDADSALP--------  138
                                             +A +   P  + D +  +         
Sbjct  121  LSSLGCQDTVMLEGDAALCLNLNGSLKMPGPPGNAGSKRRPCCQGDPNGDIVLLSAVYPR  180

Query  139  ----RHSVPVPATELGSTELVTTKTA  160
                 H  P+PATELG+T LVTTKT 
Sbjct  181  HEECNHGFPLPATELGATALVTTKTT  206

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tumor necrosis factor receptor superfamily member 13C [Bos taurus]

Sequence ID: ref|NP_001180121.1|Length: 185Number of Matches: 1

Related Information

Gene-associated gene details

UniGene-clustered expressed sequence tags

Map Viewer-aligned genomic context

Range 1: 2 to 183GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
116 bits(290)	2e-29()	Composition-based stats.	80/182(44%)	95/182(52%)	23/182(12%)

Query  5    RLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT---GHTSSLEPGTALQPQ  61
            +   RS R +D   PTQC QT+CFDPLVRNCV+C L  T      G  SSL PGTALQPQ
Sbjct  2    QRGRRSLRGKDRPAPTQCLQTQCFDPLVRNCVACSLLRTTGPRLAGDRSSLAPGTALQPQ  61

Query  62   EGSALRPDVALLVGAPALLGLILALTLVGLVSL------VSWRWRQQLRTAS--PDTSEG  113
            E +            P    L  A  L+GL         V+W+ R++   A+  P+  E 
Sbjct  62   ESAGPGTPAEAEAALPLPALLFGAPALLGLALALALLGLVTWKRRRRQPGAAVVPEAPEA  121

Query  114  ------------VQQETPHASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTAG  161
                        +   T  A+AP W    ED  +  P HSVPVPATELGSTELVTTKTAG
Sbjct  122  AEVPESLDVDTTLSPGTLDATAPIWLLPSEDPAATPPTHSVPVPATELGSTELVTTKTAG  181

Query  162  PE  163
            PE
Sbjct  182  PE  183

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PREDICTED: tumor necrosis factor receptor superfamily member 13C isoform X1 [Chlorocebus sabaeus]

Sequence ID: ref|XP_007974121.1|Length: 185Number of Matches: 1

Related Information

Range 1: 2 to 184GenPept Graphics Next Match Previous Match

Alignment statistics for match #1
Score	Expect	Method	Identities	Positives	Gaps	Frame
114 bits(285)	1e-28()	Composition-based stats.	78/184(42%)	86/184(46%)	25/184(13%)

Query  5    RLRVRSQRSRDSSVPTQCNQTECFDPLVRNCVSCELFHTPDT---GHTSSLEPGTALQPQ  61
            +   RS R RD+  PT C   ECFD LVR+CV+C L  TP        SS  P TALQPQ
Sbjct  2    KRGPRSLRGRDAPAPTPCVPAECFDLLVRHCVACGLLRTPRPKPAAPASSPAPRTALQPQ  61

Query  62   EGSALRPDVALLVGAPALLGLILALTLVGLVSLVSWRWRQQLRTASPDTSEGVQQETPH-  120
            E        A L   P LL    AL  + LV  +        R            E P  
Sbjct  62   ESVGAGAGEAAL-SLPGLLFGAPALLGLALVLALVLVGLASWRRRQRRLRGASFAEAPDG  120

Query  121  --------------------ASAPTWPPLKEDADSALPRHSVPVPATELGSTELVTTKTA  160
                                A+APTWPP  ED  +  P HSVPVPATELGSTELVTTKTA
Sbjct  121  DKDKDEPLDKVIILSPGISDAAAPTWPPPGEDPGTTPPGHSVPVPATELGSTELVTTKTA  180

Query  161  GPEQ  164
            GPEQ
Sbjct  181  GPEQ  184

Basic Local Alignment Search Tool

ref|XP_006521491.1| (164 letters)

Graphic Summary

Distribution of 86 Blast Hits on the Query Sequence [?]

Descriptions

Sequences producing significant alignments with E-value BETTER than threshold

Sequences with E-value WORSE than threshold

Alignments

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